Stem-loop ami-mir-1416

Accession

MI0029849

Description

Alligator mississippiensis ami-mir-1416 precursor miRNA

Sequence

agugauggcugacacuccuUCCUUAACUCAUACCGCUGUGccugccuucuuucuuucacaauugugugaguugaguucagagugucaguccaacccugc
((.(.((((((((((((....((((((((((((...((((...(........)...))))...))))))))))))....))))))))).))).).))..

Structure

--  u a   -         cuUC            CGC    ccu ccu 
  ag g ugg cugacacuc    CUUAACUCAUAC   UGUG   g   u
  || | ||| |||||||||    ||||||||||||   ||||   |    
  uc c acc gacugugag    gaguugagugug   acac   c   c
cg  c a   u         acuu            uua    uuu uuu 

Annotation confidence Not enough data

Genome context

AKHW03006358.1: 28059827-28059925 [-]

Mature ami-miR-1416-5p

• Accession: MIMAT0038316
• Description: Alligator mississippiensis ami-miR-1416-5p mature miRNA
• Sequence: 20 - UCCUUAACUCAUACCGCUGUG - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196