miRBase entry: ami-mir-456

Stem-loop ami-mir-456


Accession
MI0029831
Description
Alligator mississippiensis ami-mir-456 precursor miRNA


Sequence

uguguaugugugagcaggcaucuucucagccuacauguggauucuuaaaucugCAGGCUGGUUAGAUGGUUGUcauacauucaccuga
.(((.((((((((.(((.(((((..(((((((....(((((((....))))))))))))))..))))).))))))))))).)))....

Structure
---u   u        g   g     uc       acau       c 
    gug auguguga cag caucu  ucagccu    guggauu u
    ||| |||||||| ||| |||||  |||||||    |||||||  
    cac uacauacU GUU GUAGA  GGUCGGA    Cgucuaa u
aguc   u        -   G     UU       ----       a 


Annotation confidence Not enough data
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Genome context
AKHW03006164.1: 11020018-11020105 [+]

Database links

Mature ami-miR-456-3p

Accession MIMAT0038289
Description Alligator mississippiensis ami-miR-456-3p mature miRNA
Sequence 54 - CAGGCUGGUUAGAUGGUUGU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196