Stem-loop ami-mir-212

Accession

MI0029796

Description

Alligator mississippiensis ami-mir-212 precursor miRNA

Sequence

cagcgcgucggcACCUUGGCUCUAGACUGCUUAcugcugagcacggcgaccggaacagUAACAGUCUACAGUCAUGGCUAcugaagcaugaca
....((.((((..((.(((((.(((((((.(((((((((..(.....)..)))..))))))))))))).))))).))...)))).))......

Structure

--cagc  g    -cA  U     C       C      --   ag a 
      gc ucgg   CC UGGCU UAGACUG UUAcug  cug  c c
      || ||||   || ||||| ||||||| ||||||  |||  | g
      cg aguc   GG ACUGA AUCUGAC AAUgac  ggc  g g
acagua  a    AUC  U     C       -      aa   ca c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ami-miR-212-5p

• Accession: MIMAT0038236
• Description: Alligator mississippiensis ami-miR-212-5p mature miRNA
• Sequence: 13 - ACCUUGGCUCUAGACUGCUUA - 33
• Evidence: experimental ; Illumina [1]

Mature ami-miR-212-3p

• Accession: MIMAT0038237
• Description: Alligator mississippiensis ami-miR-212-3p mature miRNA
• Sequence: 59 - UAACAGUCUACAGUCAUGGCUA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196