miRBase entry: ami-mir-205a

Stem-loop ami-mir-205a


Accession
MI0029791
Description
Alligator mississippiensis ami-mir-205a precursor miRNA


Sequence

uccauggauucuguugUCCUUCAUUCCACCGGAGUCUGucucauaccuaaucaGAUUUCAGUGGAGUGAAGCACAagagacauggaguug
((((((...(((.((((.(((((((((((.((((((((.............)))))))).))))))))))).)))).)))))))))....

Structure
----      gau   g    C           C        ucuca 
    uccaug   ucu uugU CUUCAUUCCAC GGAGUCUG     u
    ||||||   ||| |||| ||||||||||| ||||||||     a
    agguac   aga aACA GAAGUGAGGUG CUUUAGac     c
guug      ---   g    C           A        uaauc 


Annotation confidence Not enough data
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Genome context
AKHW03006004.1: 182483-182572 [-]

Database links

Mature ami-miR-205a-5p

Accession MIMAT0038228
Description Alligator mississippiensis ami-miR-205a-5p mature miRNA
Sequence 17 - UCCUUCAUUCCACCGGAGUCUG - 38
Evidence experimental
Illumina [1]

Mature ami-miR-205a-3p

Accession MIMAT0038229
Description Alligator mississippiensis ami-miR-205a-3p mature miRNA
Sequence 54 - GAUUUCAGUGGAGUGAAGCACA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196