Stem-loop ami-mir-191

Accession

MI0029773

Description

Alligator mississippiensis ami-mir-191 precursor miRNA

Sequence

gcgacagcgggCAACGGAAUCCCAAAAGCAGCUgucuuccgcucggcaccucagcugcgcuuggauuucguucccugcucucccgcc
(((..((((((.((((((((((.((..(((((((....((....)).....)))))))..)))))))))))).))))))....))).

Structure

-   --ac      C          C  AA       -ucuu  g 
 gcg    agcggg AACGGAAUCC AA  GCAGCUg     cc c
 |||    |||||| |||||||||| ||  |||||||     ||  
 cgc    ucgucc uugcuuuagg uu  cgucgac     gg u
c   ccuc      c          -  cg       uccac  c 

Annotation confidence Not enough data

Genome context

AKHW03003150.1: 63654-63740 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ami-mir-191

Mature ami-miR-191-5p

• Accession: MIMAT0038205
• Description: Alligator mississippiensis ami-miR-191-5p mature miRNA
• Sequence: 12 - CAACGGAAUCCCAAAAGCAGCU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196