miRBase entry: ami-mir-187

Stem-loop ami-mir-187


Accession
MI0029770
Description
Alligator mississippiensis ami-mir-187 precursor miRNA


Sequence

ugugagaccuccgGCUACAACACAGGACAUGGGAGcuuuucugaacccUCGUGUCUUGUGUUGCAGCCAgaggggcacauc
((((...((((.((((.((((((((((((((((.(.((....)).).)))))))))))))))).)))).))))..))))..

Structure
--    aga    c    A                A c  u 
  ugug   ccuc gGCU CAACACAGGACAUGGG G uu u
  ||||   |||| |||| |||||||||||||||| | ||  
  acac   ggag CCGA GUUGUGUUCUGUGCUc c ag c
cu    -gg    A    C                c a  u 


Annotation confidence Not enough data
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Genome context
AKHW03006597.1: 1380487-1380567 [+]

Database links

Mature ami-miR-187-5p

Accession MIMAT0038200
Description Alligator mississippiensis ami-miR-187-5p mature miRNA
Sequence 14 - GCUACAACACAGGACAUGGGAG - 35
Evidence experimental
Illumina [1]

Mature ami-miR-187-3p

Accession MIMAT0038201
Description Alligator mississippiensis ami-miR-187-3p mature miRNA
Sequence 49 - UCGUGUCUUGUGUUGCAGCCA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196