Stem-loop ami-mir-184

Accession

MI0029769

Description

Alligator mississippiensis ami-mir-184 precursor miRNA

Sequence

acgccauucccaucuCCUUAUCACUUUUCCAGCCCAGCuuucucaugcucacuguUGGACGGAGAACUGAUAAGGGUaugugacugacacgag
....((.((.(((.(((((((((.((((((.(.(((((...............))))).))))))).))))))))).))).)).)).......

Structure

---acgc  u  c   c         C      A C     uuucuc 
       ca uc cau uCCUUAUCA UUUUCC G CCAGC      a
       || || ||| ||||||||| |||||| | |||||      u
       gu ag gua GGGAAUAGU AAGAGG C GGUug      g
gagcaca  c  u   U         C      - A     ucacuc 

Annotation confidence Not enough data

Genome context

AKHW03000087.1: 29031-29123 [-]

Mature ami-miR-184-5p

• Accession: MIMAT0038198
• Description: Alligator mississippiensis ami-miR-184-5p mature miRNA
• Sequence: 16 - CCUUAUCACUUUUCCAGCCCAGC - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-184-3p

• Accession: MIMAT0038199
• Description: Alligator mississippiensis ami-miR-184-3p mature miRNA
• Sequence: 56 - UGGACGGAGAACUGAUAAGGGU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196