Stem-loop ami-mir-153-1

Accession

MI0029758

Description

Alligator mississippiensis ami-mir-153-1 precursor miRNA

Sequence

ucucgcggcugccgggggcauuuuugugauuugcagcucguggucuggguccagUUGCAUAGUCACAAAAGUGAUCgucggcggccgcgccug
...((((((((((((.((((((((((((((((((((((...((.......))))))))).))))))))))))).)).))))))))))))....

Structure

-ucu            g  -             -       cgu  uc 
    cgcggcugccgg gg cauuuuugugauu ugcagcu   gg  u
    |||||||||||| || ||||||||||||| |||||||   ||  g
    gcgccggcggcu CU GUGAAAACACUGA ACGUUga   cc  g
gucc            g  A             U       ---  ug 

Annotation confidence Not enough data

Genome context

AKHW03002857.1: 22521-22613 [-]

Mature ami-miR-153-3p

• Accession: MIMAT0038184
• Description: Alligator mississippiensis ami-miR-153-3p mature miRNA
• Sequence: 55 - UUGCAUAGUCACAAAAGUGAUC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196