miRBase entry: ami-mir-126

Stem-loop ami-mir-126


Accession
MI0029724
Description
Alligator mississippiensis ami-mir-126 precursor miRNA


Sequence

cggccCAUUAUUACUUUUGGUACGCGcugugacacuucaaacUCGUACCGUGAGUAAUAAUGCGcugcggccagcacc
.(((((((((((((((.(((((((.....(((....)))....))))))).)))))))))))......))))......

Structure
-----c    ------           U       CGcug   c 
      ggcc      CAUUAUUACUU UGGUACG     uga a
      ||||      ||||||||||| |||||||     |||  
      ccgg      GUAAUAAUGAG GCCAUGC     acu c
ccacga    cgucGC           U       -Ucaa   u 


Annotation confidence Not enough data
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Genome context
AKHW03006215.1: 19020324-19020401 [-]

Database links

Mature ami-miR-126-5p

Accession MIMAT0038131
Description Alligator mississippiensis ami-miR-126-5p mature miRNA
Sequence 6 - CAUUAUUACUUUUGGUACGCG - 26
Evidence experimental
Illumina [1]

Mature ami-miR-126-3p

Accession MIMAT0038132
Description Alligator mississippiensis ami-miR-126-3p mature miRNA
Sequence 43 - UCGUACCGUGAGUAAUAAUGCG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196