miRBase entry: ami-let-7g

Stem-loop ami-let-7g


Accession
MI0029650
Description
Alligator mississippiensis ami-let-7g precursor miRNA


Sequence

gccugauuccaagcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauuaaCUGUACAGGCCACUGCCUUGCcugggacag
..(((.(((((.((.((((((((.((((((((((((....(((((.((.((((....))))))..))))))))))))))))).)))))))))).))))))))

Structure
gc   a     a  U        A            ugag     -a  a    a 
  cug uucca gc GAGGUAGU GUUUGUACAGUU    ggucu  ug uacc c
  ||| ||||| || |||||||| ||||||||||||    |||||  || ||||  
  gac agggu CG UUCCGUCA CGGACAUGUCaa    uuaga  ac augg c
--   -     c  -        C            ----     gg  -    c 


Annotation confidence Not enough data
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Genome context
AKHW03003049.1: 483082-483183 [-]

Database links

Mature ami-let-7g-5p

Accession MIMAT0038014
Description Alligator mississippiensis ami-let-7g-5p mature miRNA
Sequence 15 - UGAGGUAGUAGUUUGUACAGUU - 36
Evidence experimental
Illumina [1]

Mature ami-let-7g-3p

Accession MIMAT0038015
Description Alligator mississippiensis ami-let-7g-3p mature miRNA
Sequence 73 - CUGUACAGGCCACUGCCUUGC - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196