miRBase entry: ami-let-7a-2

Stem-loop ami-let-7a-2


Accession
MI0029640
Description
Alligator mississippiensis ami-let-7a-2 precursor miRNA


Sequence

acugcaugcauccagguUGAGGUAGUAGGUUGUAUAGUUuagaaugacaccaagggagauaaCUGUACAACCUCCUAGCUUUCCuugggucuugcac
..((((.(.(((((((..(((.(((.(((((((((((((.....................))))))))))))).))).)))..)))))))).)))).

Structure
ac    u c       uU   G   U             uagaaugac 
  ugca g auccagg  GAG UAG AGGUUGUAUAGUU         a
  |||| | |||||||  ||| ||| |||||||||||||         c
  acgu c uggguuC  UUC AUC UCCAACAUGUCaa         c
-c    u -       CU   G   C             uagagggaa 


Annotation confidence Not enough data
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Genome context
AKHW03002395.1: 3936824-3936920 [+]

Database links

Mature ami-let-7a-5p

Accession MIMAT0037999
Description Alligator mississippiensis ami-let-7a-5p mature miRNA
Sequence 18 - UGAGGUAGUAGGUUGUAUAGUU - 39
Evidence experimental
Illumina [1]

Mature ami-let-7a-2-3p

Accession MIMAT0038001
Description Alligator mississippiensis ami-let-7a-2-3p mature miRNA
Sequence 63 - CUGUACAACCUCCUAGCUUUCC - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196