miRBase entry: cpi-mir-727

Stem-loop cpi-mir-727


Accession
MI0029638
Description
Chrysemys picta cpi-mir-727 precursor miRNA


Sequence

uugcccuguaugucauuuucagucuucaauuccucccagcccauuaaauggaaacugagUUGAGGCGAGUUGAAGACUAAAaaugcugugcagaauca
.....(((((((.((((((.((((((((((((..((((((((((...)))).......)))).)).)))))))))))).)))))).))))))).....

Structure
uugcc       u      c            cu  -    -------    u 
     cuguaug cauuuu agucuucaauuc  cc cagc       ccau  
     ||||||| |||||| ||||||||||||  || ||||       |||| a
     gacgugu guaaAA UCAGAAGUUGAG  GG GUUg       ggua  
acuaa       c      A            -C  A    agucaaa    a 


Annotation confidence Not enough data
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Genome context
KK088247.1: 4735799-4735896 [-]

Database links

Mature cpi-miR-727-3p

Accession MIMAT0037998
Description Chrysemys picta cpi-miR-727-3p mature miRNA
Sequence 60 - UUGAGGCGAGUUGAAGACUAAA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196