miRBase entry: cpi-mir-9584

Stem-loop cpi-mir-9584


Accession
MI0029621
Description
Chrysemys picta cpi-mir-9584 precursor miRNA


Sequence

aaccaucuagagagCUGUGACUGUUUAGAUGGUCGUGugggguaugcgcacaCAGCCUCAGCAGUCACUGCUuuuuagauguuu
...((((((((((((.(((((((((..((.(((.(((((.(.....).))))).)))))))))))))).))))))))))))...

Structure
aac            U         UA  U   C     g g 
   caucuagagagC GUGACUGUU  GA GGU GUGug g u
   |||||||||||| |||||||||  || ||| ||||| | a
   guagauuuuUCG CACUGACGA  CU CCG Cacac c u
uuu            U         --  -   A     g g 


Annotation confidence Not enough data
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Genome context
KK088210.1: 2524206-2524289 [-]

Database links

Mature cpi-miR-9584-5p

Accession MIMAT0037964
Description Chrysemys picta cpi-miR-9584-5p mature miRNA
Sequence 15 - CUGUGACUGUUUAGAUGGUCGUG - 37
Evidence experimental
Illumina [1]

Mature cpi-miR-9584-3p

Accession MIMAT0037965
Description Chrysemys picta cpi-miR-9584-3p mature miRNA
Sequence 53 - CAGCCUCAGCAGUCACUGCU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196