miRBase entry: cpi-mir-9582

Stem-loop cpi-mir-9582


Accession
MI0029619
Description
Chrysemys picta cpi-mir-9582 precursor miRNA


Sequence

gcauugcccugcaUCUUGUGUAGUUCUUUAGCAUuuucuacccauuuugcacagauGUAAAUAACUACACAAGGUGCagggcaguggaagug
.((((((((((((((((((((((((.((((.(((((................))))))))).))))))))))))))))))))))))......

Structure
-----g                        C    G     ucuaccc 
      cauugcccugcaUCUUGUGUAGUU UUUA CAUuu       a
      |||||||||||||||||||||||| |||| |||||        
      gugacgggaCGUGGAACACAUCAA AAAU Guaga       u
gugaag                        U    -     cacguuu 


Annotation confidence Not enough data
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Genome context
KK082916.1: 8506501-8506592 [+]

Database links

Mature cpi-miR-9582-5p

Accession MIMAT0037960
Description Chrysemys picta cpi-miR-9582-5p mature miRNA
Sequence 14 - UCUUGUGUAGUUCUUUAGCAU - 34
Evidence experimental
Illumina [1]

Mature cpi-miR-9582-3p

Accession MIMAT0037961
Description Chrysemys picta cpi-miR-9582-3p mature miRNA
Sequence 57 - GUAAAUAACUACACAAGGUGC - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196