miRBase entry: cpi-mir-1677g-1

Stem-loop cpi-mir-1677g-1


Accession
MI0029600
Description
Chrysemys picta cpi-mir-1677g-1 precursor miRNA


Sequence

cacuuagucugaaggugaaauccuggcucuguugaugucuauagaaguuuuaccauUGACUUCAGUAGAAUCAGGAUUucucccucaugaguguu
((((((...(((.((.((((((((((.((((((((.(((..................))).)))))))).)))))))))).)).)))))))))..

Structure
--      guc   a  u          c        u   uauagaag 
  cacuua   uga gg gaaauccugg ucuguuga guc        u
  ||||||   ||| || |||||||||| |||||||| |||         
  gugagu   acu cc cuUUAGGACU AGAUGACU CAG        u
uu      ---   c  u          A        U   Uuaccauu 


Annotation confidence Not enough data
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Genome context
KK082988.1: 2082489-2082583 [+]

Database links

Mature cpi-miR-1677g-3p

Accession MIMAT0037931
Description Chrysemys picta cpi-miR-1677g-3p mature miRNA
Sequence 57 - UGACUUCAGUAGAAUCAGGAUU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196