miRBase entry: cpi-mir-1416

Stem-loop cpi-mir-1416


Accession
MI0029591
Description
Chrysemys picta cpi-mir-1416 precursor miRNA


Sequence

gauggaugacaccUCCUUAACUCAUGCCGCUGUGccuuucacccccacucccacaauuguaugaguugaguacagaguaucagacu
...(..(((.((((.((((((((((((...((((.................))))...))))))))))))...)).)).)))..).

Structure
gau ga   c  -  --C            CGC    ccuuuca 
   g  uga ac cU   CUUAACUCAUGC   UGUG       c
   |  ||| || ||   ||||||||||||   ||||       c
   c  acu ug ga   gaguugaguaug   acac       c
--u ag   a  a  cau            uua    ccucacc 


Annotation confidence Not enough data
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Genome context
KK082927.1: 9195609-9195694 [-]

Database links

Mature cpi-miR-1416-5p

Accession MIMAT0037916
Description Chrysemys picta cpi-miR-1416-5p mature miRNA
Sequence 14 - UCCUUAACUCAUGCCGCUGUG - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196