miRBase entry: cpi-mir-455

Stem-loop cpi-mir-455


Accession
MI0029572
Description
Chrysemys picta cpi-mir-455 precursor miRNA


Sequence

ucccuggugugagggUAUGUGCCCUUGGACUACAUCGuggaagccagcaccAUGCAGUCCAUGGGCAUAUACacuugccucaagguuuau
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).)).....

Structure
----u  c   u     g          U      A   C   gaa 
     cc ugg gugag gUAUGUGCCC UGGACU CAU Gug   g
     || ||| ||||| |||||||||| |||||| ||| |||    
     gg acu cguuc CAUAUACGGG ACCUGA GUA cac   c
uauuu  a   c     a          U      C   c   gac 


Annotation confidence Not enough data
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Genome context
KK082974.1: 1002607-1002696 [-]

Database links

Mature cpi-miR-455-5p

Accession MIMAT0037887
Description Chrysemys picta cpi-miR-455-5p mature miRNA
Sequence 16 - UAUGUGCCCUUGGACUACAUCG - 37
Evidence experimental
Illumina [1]

Mature cpi-miR-455-3p

Accession MIMAT0037888
Description Chrysemys picta cpi-miR-455-3p mature miRNA
Sequence 52 - AUGCAGUCCAUGGGCAUAUAC - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196