miRBase entry: cpi-mir-367

Stem-loop cpi-mir-367

Accession

MI0029561

Description

Chrysemys picta cpi-mir-367 precursor miRNA

Sequence

ucuuaaacugcaggccacuacuguugcuaauaugcaacucuguuguguaaaagcuggAAUUGCACUUUAGCAAUGGUGauggacuguaagacauac
........(((((.(((.((((((((((((..(((((.((((((.......))).))).)))))..)))))))))))).))).)))))........

Structure

ucuuaaac     g   c            ua     c   -   gu 
        ugcag cca uacuguugcuaa  ugcaa ucu guu  g
        ||||| ||| ||||||||||||  ||||| ||| |||  u
        auguc ggu GUGGUAACGAUU  ACGUU Agg cga  a
cauacaga     a   a            UC     A   u   aa

Annotation confidence Not enough data

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Genome context

KK082956.1: 5874433-5874528 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cpi-mir-367

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpi-miR-367-3p

Accession	MIMAT0037872
Description	Chrysemys picta cpi-miR-367-3p mature miRNA
Sequence	58 - AAUUGCACUUUAGCAAUGGUG - 78
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196