miRBase entry: cpi-mir-223

Stem-loop cpi-mir-223


Accession
MI0029549
Description
Chrysemys picta cpi-mir-223 precursor miRNA


Sequence

ugcagugcugcgcucCGUGUAUUUGACAAGCUGAGUUUgacacucaauguggcagagUGUCAGUUUGUCAAAUACCCCAagugaagcauuugcuua
.((((((((.((((..(.((((((((((((((((.((((.(((.....))).))))...)))))))))))))))).)..)))).)))).))))...

Structure
--u    -    g    cC U                --G    a   u 
   gcag ugcu cgcu  G GUAUUUGACAAGCUGA   UUUg cac c
   |||| |||| ||||  | ||||||||||||||||   |||| ||| a
   cguu acga guga  C CAUAAACUGUUUGACU   agac gug a
auu    u    a    AC C                GUg    g   u 


Annotation confidence Not enough data
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Genome context
KK083044.1: 1602018-1602113 [+]

Database links

Mature cpi-miR-223-5p

Accession MIMAT0037856
Description Chrysemys picta cpi-miR-223-5p mature miRNA
Sequence 16 - CGUGUAUUUGACAAGCUGAGUUU - 38
Evidence experimental
Illumina [1]

Mature cpi-miR-223-3p

Accession MIMAT0037857
Description Chrysemys picta cpi-miR-223-3p mature miRNA
Sequence 58 - UGUCAGUUUGUCAAAUACCCCA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196