Stem-loop cpi-mir-202

Accession

MI0029526

Description

Chrysemys picta cpi-mir-202 precursor miRNA

Sequence

gcucguuguuccuuuUUCCUAUGCAUAUACUUCUUUGagaauuggaacuaaagaggcauagggcaugggaaaauggggcgacugagg
.(((((((((((.(((((((((((.(((.(((((((.((........))))))))).)))..))))))))))).)))))))).))).

Structure

g   -        u           -A   A       G  aau 
 cuc guuguucc uuUUCCUAUGC  UAU CUUCUUU ag   u
 ||| |||||||| |||||||||||  ||| ||||||| ||    
 gag cagcgggg aaaaggguacg  aua ggagaaa uc   g
g   u        u           gg   c       -  aag 

Annotation confidence Not enough data

Genome context

KK088211.1: 4361995-4362081 [+]

Mature cpi-miR-202-5p

• Accession: MIMAT0037824
• Description: Chrysemys picta cpi-miR-202-5p mature miRNA
• Sequence: 16 - UUCCUAUGCAUAUACUUCUUUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196