miRBase entry: cpi-mir-142-2

Stem-loop cpi-mir-142-2


Accession
MI0029485
Description
Chrysemys picta cpi-mir-142-2 precursor miRNA


Sequence

acagugcacuccucCAUAAAGUAGAAAGCACUACUAaaccgccgcgucccgUGUAGUGUUUCCUACUUUAUGGaugaguguacuguga
(((((((((((.((((((((((((.(((((((((..................))))))))).)))))))))))).)))))))))))..

Structure
--           c            A         UAaaccgc 
  acagugcacuc ucCAUAAAGUAG AAGCACUAC        c
  ||||||||||| |||||||||||| |||||||||         
  ugucaugugag aGGUAUUUCAUC UUUGUGAUG        g
ag           u            C         Ugcccugc 


Annotation confidence Not enough data
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Genome context
KK083282.1: 271379-271466 [-]

Database links

Mature cpi-miR-142-5p

Accession MIMAT0037766
Description Chrysemys picta cpi-miR-142-5p mature miRNA
Sequence 15 - CAUAAAGUAGAAAGCACUACUA - 36
Evidence experimental
Illumina [1]

Mature cpi-miR-142-3p

Accession MIMAT0037767
Description Chrysemys picta cpi-miR-142-3p mature miRNA
Sequence 52 - UGUAGUGUUUCCUACUUUAUGG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196