Stem-loop sequence cpi-mir-10c

Accession

MI0029397 (change log)

Description

Chrysemys picta miR-10c stem-loop

Stem-loop

   ---auaca            ua    g    au          ugaaua 
5'         gucgucuauaug  cccu uaga  cgaauuugug      u
           ||||||||||||  |||| ||||  ||||||||||      u
3'         uagcagguauau  gggg aucu  gcuuaaacac      u
   cgagaccg            ga    -    cu          ugagag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Chrysemys_picta_bellii-3.0.3; GCA_000241765.2): KK083067.1: 969489-969585 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029397

Mature sequence cpi-miR-10c-5p

• Accession: MIMAT0037629
• Sequence: 19 - acccuguagaaucgaauuugug - 40
• Evidence: experimental; Illumina [1]

Mature sequence cpi-miR-10c-3p

• Accession: MIMAT0037630
• Sequence: 58 - caaauucgucucuaggggagu - 78
• Evidence: experimental; Illumina [1]

References

1. PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).