miRBase entry: aca-mir-9572

Stem-loop aca-mir-9572


Accession
MI0029360
Description
Anolis carolinensis aca-mir-9572 precursor miRNA


Sequence

ucucuggguuacUGUGGGUUUUCCAGUCUGUAUGgccauguuccagaagcaUACAGCCUGGAAAACUUGCAGCaacccagugg
.(.(((((((.(((((((((((((((.(((((((....((...))....))))))).))))))))))))))).))))))).).

Structure
u u       a               U       gcca  u 
 c cuggguu cUGUGGGUUUUCCAG CUGUAUG    ug  
 | ||||||| ||||||||||||||| |||||||    || u
 g gacccaa GACGUUCAAAAGGUC GACAUac    ac  
g u       C               C       gaag  c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL343262.1: 1379986-1380068 [-]

Database links

Mature aca-miR-9572-5p

Accession MIMAT0037576
Description Anolis carolinensis aca-miR-9572-5p mature miRNA
Sequence 13 - UGUGGGUUUUCCAGUCUGUAUG - 34
Evidence experimental
Illumina [1]

Mature aca-miR-9572-3p

Accession MIMAT0037577
Description Anolis carolinensis aca-miR-9572-3p mature miRNA
Sequence 52 - UACAGCCUGGAAAACUUGCAGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196