miRBase entry: aca-mir-302a

Stem-loop aca-mir-302a

Accession

MI0029357

Description

Anolis carolinensis aca-mir-302a precursor miRNA

Sequence

ccacuacuuuaauaugaaaguacuuguuuuuguuccuuuuaaaAAGUGCUUUCAUAUUUUAGUGAugg
(((.((((..(((((((((((((((..................)))))))))))))))..)))).)))

Structure

   c    uu               guuuuugu 
cca uacu  aauaugaaaguacuu        u
||| ||||  |||||||||||||||         
ggu GUGA  UUAUACUUUCGUGAA        c
   A    UU               aaauuuuc

Annotation confidence Not enough data

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Genome context

chr5: 142963789-142963856 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from aca-mir-302a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-302a-3p

Accession	MIMAT0037572
Description	Anolis carolinensis aca-miR-302a-3p mature miRNA
Sequence	44 - AAGUGCUUUCAUAUUUUAGUGA - 65
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196