miRBase entry: dvi-mir-9550

Stem-loop dvi-mir-9550


Accession
MI0029288
Description
Drosophila virilis dvi-mir-9550 precursor miRNA


Sequence

acaaugcuucagauguUUCAUGUUCAGACACUUGGCGCagcacuuuaagggggcuCUAGGUACUACAAACGUGGAGCACacugaagucacau
.....(((((((.(((((((((((.((..((((((.((..(........)..)).)))))).))...)))))))))))..))))))).....

Structure
acaau       -a           --C  AC      C  ag acu 
     gcuucag  uguUUCAUGUU   AG  ACUUGG GC  c   u
     |||||||  |||||||||||   ||  |||||| ||  |    
     ugaaguc  ACGAGGUGCAA   UC  UGGAUC cg  g   u
uacac       aC           ACA  -A      u  gg gaa 


Annotation confidence Not enough data
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Genome context
scaffold_13049: 24646575-24646666 [-]

Database links

Mature dvi-miR-9550-5p

Accession MIMAT0035640
Description Drosophila virilis dvi-miR-9550-5p mature miRNA
Sequence 17 - UUCAUGUUCAGACACUUGGCGC - 38
Evidence experimental
Illumina [1]

Mature dvi-miR-9550-3p

Accession MIMAT0035641
Description Drosophila virilis dvi-miR-9550-3p mature miRNA
Sequence 56 - CUAGGUACUACAAACGUGGAGCAC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372