miRBase entry: dvi-mir-iab-8

Stem-loop dvi-mir-iab-8


Accession
MI0029276
Description
Drosophila virilis dvi-mir-iab-8 precursor miRNA
Gene family
MIPF0000854; mir-iab-8


Sequence

cgucgcugguguuuccucguguUACGUAUACUGAAGGUAUACCGgauaggauacacUCAGGAUACAUUCAGUAUACGUauacgaaguugcacaggcucua
....(((.((((..(.((((((.((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))))))))).)..)))).)))....

Structure
cguc   g    uu c      U            G    A  G  ua g 
    gcu gugu  c ucgugu ACGUAUACUGAA GUAU CC ga  g a
    ||| ||||  | |||||| |||||||||||| |||| || ||  |  
    cgg cacg  g agcaua UGCAUAUGACUU CAUA GG CU  c u
aucu   a    uu a      -            A    -  A  ca a 


Annotation confidence Not enough data
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Genome context
scaffold_12855: 414690-414789 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dvi-mir-iab-8
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-iab-8-5p

Accession MIMAT0035616
Description Drosophila virilis dvi-miR-iab-8-5p mature miRNA
Sequence 23 - UACGUAUACUGAAGGUAUACCG - 44
Evidence experimental
Illumina [1]

Mature dvi-miR-iab-8-3p

Accession MIMAT0035617
Description Drosophila virilis dvi-miR-iab-8-3p mature miRNA
Sequence 57 - UCAGGAUACAUUCAGUAUACGU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372