miRBase entry: dvi-mir-964

Stem-loop dvi-mir-964


Accession
MI0029257
Description
Drosophila virilis dvi-mir-964 precursor miRNA


Sequence

ugaaaauacauuaaguuuaacuuaucUUAGAAUAGGGGAGCUUAACUuuguaugaacauuuaagcuaagagccucaauucuuagauaaugcgacuaacaac
.............((((....((((((.(((((.((((..((((.((((((....)))...))).))))..)))).))))).))))))...))))......

Structure
ugaaaauacauua    uaac      U     A    AG    A   ---   a 
             aguu    uuaucU AGAAU GGGG  CUUA CUu   ugu u
             ||||    |||||| ||||| ||||  |||| |||   |||  
             ucag    aauaga ucuua cucc  gaau gaa   aca g
-------caacaa    -cgu      u     a    ga    c   uuu   a 


Annotation confidence Not enough data
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Genome context
scaffold_12963: 3616474-3616574 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dvi-mir-964
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dvi-miR-964-5p

Accession MIMAT0035583
Description Drosophila virilis dvi-miR-964-5p mature miRNA
Sequence 27 - UUAGAAUAGGGGAGCUUAACU - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24448446
    Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "RNA (2014) 20:360-372