miRBase entry: bma-mir-2h-2

Stem-loop bma-mir-2h-2


Accession
MI0029227
Description
Brugia malayi bma-mir-2h-2 precursor miRNA

Literature search
3 open access papers mention bma-mir-2h-2
(34 sentences)

Sequence

uucccgaaaauacuaauggagcAGUCGUAUCGACUCUGAUAUguugucacauuguuucucaUAUCGCAGAUUCGAUUCGACAAgcugcacuuguagauaccggggauaaugccacuca
((((((....(((...((.(((.((((.(((((.(((((((((................))))))..))).))))).))))..))).))...))).....))))))............

Structure
------------      -aaaa   uaa  g   -A    U     C   --      uugucac 
            uucccg     uac   ug agc  GUCG AUCGA UCU  GAUAUg       a
            ||||||     |||   || |||  |||| ||||| |||  ||||||        
            aggggc     aug   ac ucg  CAGC UAGCU AGA  CUAUac       u
acucaccguaau      cauag   uuc  g   AA    U     U   CG      ucuuugu 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold153: 21047-21164 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from bma-mir-2h-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bma-miR-2h-5p

Accession MIMAT0037529
Description Brugia malayi bma-miR-2h-5p mature miRNA
Sequence 23 - AGUCGUAUCGACUCUGAUAU - 42
Evidence experimental
Illumina [1]

Mature bma-miR-2h-3p

Accession MIMAT0037530
Description Brugia malayi bma-miR-2h-3p mature miRNA
Sequence 62 - UAUCGCAGAUUCGAUUCGACAA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498