miRBase entry: bma-mir-9534

Stem-loop bma-mir-9534


Accession
MI0029225
Description
Brugia malayi bma-mir-9534 precursor miRNA

Literature search
1 open access papers mention bma-mir-9534
(1 sentences)

Sequence

auugguaguaauacuugucaagugacaguuaucuguuAUGUUAUUUUUUGGAGAAGUCGUcuguuuaagggcgacaauauaaauuaacauuggaaacaauaacugucuucaugauuucuua
...((((....)))).((((.(.(((((((((.((((((((((.(((.((.....(((((((......)))))))..)).))).))))))....)))))))))))))..).))))......

Structure
auugguaguaauacuu    a -u         c    ----      U   U  GAGAA       gu 
                guca g  gacaguuau uguu    AUGUUA UUU UG     GUCGUcu  u
                |||| |  ||||||||| ||||    |||||| ||| ||     |||||||   
                uagu c  cugucaaua acaa    uacaau aaa au     cagcggg  u
----------auucuu    a uu         -    aggu      u   u  ---aa       aa 


Annotation confidence Not enough data
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Genome context
Bmal_v3_scaffold259: 19365-19485 [+]

Database links

Mature bma-miR-9534

Accession MIMAT0037528
Description Brugia malayi bma-miR-9534 mature miRNA
Sequence 38 - AUGUUAUUUUUUGGAGAAGUCGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498