miRBase entry: bdi-MIR9493

Stem-loop bdi-MIR9493


Accession
MI0029144
Description
Brachypodium distachyon bdi-MIR9493 precursor miRNA

Literature search
1 open access papers mention bdi-MIR9493
(1 sentences)

Sequence

uuuauuauauacuccuuucauuucauaauucugauguaucuauuccuaaaaguugucuauauacauguaauauuuugauAAGAAUUAUGAAACGAAGGGAGUAguauaaaaa
....(((((((((((((((.((((((((((((....((((.............(((......)))...........)))))))))))))))).))))))))).))))))...

Structure
uuua      -         a            gaug    uauuccuaaaagu   cu 
    uuauau acuccuuuc uuucauaauucu    uauc             ugu  a
    |||||| ||||||||| ||||||||||||    ||||             |||   
    aauaug UGAGGGAAG AAAGUAUUAAGA    Auag             aca  u
-aaa      A         C            ----    --uuuuauaaugu   ua 


Annotation confidence Not enough data
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Genome context
4: 36753406-36753517 [-]

Database links

Mature bdi-miR9493

Accession MIMAT0035502
Description Brachypodium distachyon bdi-miR9493 mature miRNA
Sequence 80 - AAGAAUUAUGAAACGAAGGGAGUA - 103
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145