Stem-loop sequence bdi-MIR9493

Accession

MI0029144 (change log)

Description

Brachypodium distachyon miR9493 stem-loop

Literature search

1 open access papers mention bdi-MIR9493
(1 sentences)

Stem-loop

   uuua      -         a            gaug    uauuccuaaaagu   cu 
5'     uuauau acuccuuuc uuucauaauucu    uauc             ugu  a
       |||||| ||||||||| ||||||||||||    ||||             |||   
3'     aauaug ugagggaag aaaguauuaaga    auag             aca  u
   -aaa      a         c            ----    --uuuuauaaugu   ua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Bd21; GCA_000005505.1): 4: 36753406-36753517 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029144

Mature sequence bdi-miR9493

• Accession: MIMAT0035502
• Sequence: 80 - aagaauuaugaaacgaagggagua - 103
• Evidence: not experimental

References

1. PMID:24367943 "Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon" Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ Genome Biol. 14:R145(2013).