miRBase entry: bdi-MIR9486a

Stem-loop bdi-MIR9486a


Accession
MI0029135
Description
Brachypodium distachyon bdi-MIR9486a precursor miRNA
Gene family
MIPF0002054; MIR9486

Literature search
1 open access papers mention bdi-MIR9486a
(1 sentences)

Sequence

ucaaaggggaaaccucuaaucacuucaaggcauuuuaugaagaaaaaacccuggauccaggguuuuuucuuucauaaaAUGCUUUCAAGGGAUUAGAGGUUCcaccuuucaua
..(((((((((.(((((((((.(((.(((((((((((((((((((((((((((....)))))))))))).))))))))))))))).))).))))))))))))).)))))....

Structure
--uc     -    a         a   c               -            g 
    aaagg ggaa ccucuaauc cuu aaggcauuuuaugaa gaaaaaacccug a
    ||||| |||| ||||||||| ||| ||||||||||||||| ||||||||||||  
    uuucc cCUU GGAGAUUAG GAA UUUCGUAaaauacuu cuuuuuugggac u
auac     a    -         G   C               u            c 


Annotation confidence Not enough data
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Genome context
4: 7498369-7498481 [-]

Database links

Mature bdi-miR9486a

Accession MIMAT0035493
Description Brachypodium distachyon bdi-miR9486a mature miRNA
Sequence 79 - AUGCUUUCAAGGGAUUAGAGGUUC - 102
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145