miRBase entry: bdi-MIR9484

Stem-loop bdi-MIR9484


Accession
MI0029133
Description
Brachypodium distachyon bdi-MIR9484 precursor miRNA


Sequence

aauccUAGUGCAGGGAGAAGUCGGUCuugacaagcauacccacacuaagugaugggggucggagagaccccaaugugggcagacccuguccucagcacgcucaucaagacuggcuucuaccuggacuaggacucc
..(((((((.((((.(((((((((((((((..(((.....(((.....)))...((((((.....))))))..((.((((((...)))))).))....)))..))))))))))))))).)))).)))))))....

Structure
--aa       G    G               ca   auacccacacuaagugaugggggucggagagaccccaa  u      a 
    uccUAGU CAGG AGAAGUCGGUCuuga  agc                                      ug gggcag  
    ||||||| |||| |||||||||||||||  |||                                      || |||||| c
    aggauca gucc ucuucggucagaacu  ucg                                      ac ccuguc  
ccuc       g    a               ac   ----------------------------------cacg  u      c 


Annotation confidence Not enough data
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Genome context
2: 43034395-43034529 [-]

Database links

Mature bdi-miR9484

Accession MIMAT0035491
Description Brachypodium distachyon bdi-miR9484 mature miRNA
Sequence 6 - UAGUGCAGGGAGAAGUCGGUC - 26
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145