Stem-loop bdi-MIR9482

Accession

MI0029130

Description

Brachypodium distachyon bdi-MIR9482 precursor miRNA

Sequence

aaucaacggcacagcuuucuuggaucccucucucccuugaaggcuauuuuuuggacagguuuucaugugcaguugugcaucauuguuugccuaugaacacaagagagCCUUUGGGGAAGAAGGGAAACcaagcaagccaguguccauguuugu
.......(((((.((((.(((((.(((((.(((.(((((((((((.((((.((..(((((...((((((((....)))).)).))...)))..))..)).)))).))))))))))).))))))))..))))).))))..))))).........

Structure

--aaucaac     -a    u     -a     c   c           a    u  ga  --   uuu  -  -    g 
         ggcac  gcuu cuugg  ucccu ucu ccuugaaggcu uuuu ug  ca  ggu   ca ug ugca u
         |||||  |||| |||||  ||||| ||| ||||||||||| |||| ||  ||  |||   || || ||||  
         cugug  cgaa gaacC  AGGGA AGA GGGGUUUCCga agaa ac  gu  ccg   gu ac acgu u
uguuuguac     ac    c     AA     -   A           g    c  aa  au   uuu  u  u    g 

Annotation confidence Not enough data

Genome context

4: 18009072-18009224 [-]

Mature bdi-miR9482

• Accession: MIMAT0035488
• Description: Brachypodium distachyon bdi-miR9482 mature miRNA
• Sequence: 108 - CCUUUGGGGAAGAAGGGAAAC - 128
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145