Stem-loop sequence sly-MIR477

AccessionMI0029126 (change log)
DescriptionSolanum lycopersicum miR477 stem-loop
Literature search

2 open access papers mention sly-MIR477
(2 sentences)

Stem-loop 
      u   c   g           u    -             ucaaga       aaaca 
5' agc agg auu cuuguugucuc cccu caagggcuccucu      uccuuau     a
   ||| ||| ||| ||||||||||| |||| |||||||||||||      |||||||      
3' ucg ucc uaa gaacaacagag ggga guucuugaggagg      gggagua     g
      u   u   a           u    u             ------       cgaaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SL2.50; GCA_000188115.2) Overlapping transcripts
chr10: 3641768-3641882 [-]
intergenic
Database links

Mature sequence sly-miR477-5p

Accession MIMAT0035483
Sequence

18 -  

ugucucucccucaagggcucc

 - 38

Get sequence
Evidence experimental; Illumina [1]

Mature sequence sly-miR477-3p

Accession MIMAT0035484
Sequence

79 -  

aguucuuguagggugagacaac

 - 100

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:24376253 "Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant" Kravchik M, Sunkar R, Damodharan S, Stav R, Zohar M, Isaacson T, Arazi T J Exp Bot. 65:725-739(2014).