Stem-loop efu-mir-223

Accession

MI0028915

Description

Eptesicus fuscus efu-mir-223 precursor miRNA

Gene family

MIPF0000067; mir-223

Sequence

ugccacgcuccguguauuugacaagcugaguuggacacuccaugugguagagUGUCAGUUUGUCAAAUACCCCAAgugcggcaug
((((.((((..(.((((((((((((((......(((((((.........))))))))))))))))))))).)..)))).))))..

Structure

--    a    cc u              gaguug       cau 
  ugcc cgcu  g guauuugacaagcu      gacacuc   g
  |||| ||||  | ||||||||||||||      |||||||   u
  acgg gugA  C CAUAAACUGUUUGA      CUGUgag   g
gu    c    AC C              ------       aug 

Annotation confidence Not enough data

Genome context

JH977845.1: 665281-665365 [+]

Mature efu-miR-223

• Accession: MIMAT0035198
• Description: Eptesicus fuscus efu-miR-223 mature miRNA
• Sequence: 53 - UGUCAGUUUGUCAAAUACCCCAA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545