miRBase entry: efu-mir-140

Stem-loop efu-mir-140


Accession
MI0028907
Description
Eptesicus fuscus efu-mir-140 precursor miRNA
Gene family
MIPF0000085; mir-140


Sequence

uguguccugcCAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuaccacaggguagaaccacggacaggauaccg
.((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).))))))))..

Structure
-u        -  A             A       u  c  c 
  guguccug cC GUGGUUUUACCCU UGGUAGg ua gu  
  |||||||| || ||||||||||||| ||||||| || || a
  cauaggac gg caccaagauggga accaucu gu cg  
gc        a  -             c       u  -  u 


Annotation confidence Not enough data
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Genome context
JH977621.1: 26675376-26675456 [+]

Database links

Mature efu-miR-140

Accession MIMAT0035193
Description Eptesicus fuscus efu-miR-140 mature miRNA
Sequence 11 - CAGUGGUUUUACCCUAUGGUAG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545