miRBase entry: efu-mir-192

Stem-loop efu-mir-192

Accession

MI0028863

Description

Eptesicus fuscus efu-mir-192 precursor miRNA

Gene family

MIPF0000063; mir-192

Sequence

gcacagggcuCUGACCUAUGAAUUGACAGCCAGUGcucuugucuccucucuggcugccaauuccauaggucacagguauguucgc
(.(((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).))).)..

Structure

-- c   g g  C         -     A       UGcucuu 
  g aca g cu UGACCUAUG AAUUG CAGCCAG       g
  | ||| | || ||||||||| ||||| |||||||        
  c ugu u ga acuggauac uuaac gucgguc       u
cg u   a g  c         c     c       ucuccuc

Annotation confidence Not enough data

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Genome context

JH977826.1: 1052626-1052710 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-192

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-192

Accession	MIMAT0035158
Description	Eptesicus fuscus efu-miR-192 mature miRNA
Sequence	11 - CUGACCUAUGAAUUGACAGCCAGUG - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545