miRBase entry: efu-mir-532

Stem-loop efu-mir-532


Accession
MI0028858
Description
Eptesicus fuscus efu-mir-532 precursor miRNA
Gene family
MIPF0000113; mir-188


Sequence

uucucucuuaCAUGCCUUGAGUGUAGGACCGUUgucaucuuaauuacccucccacacccaaggcuugcaggagggcaag
..(((((((.((.((((((.((((.(((..((.............))..))).)))).)))))).)).)))))))....

Structure
--uu       a  U      A    A   CC  Uguca 
    cucucuu CA GCCUUG GUGU GGA  GU     u
    ||||||| || |||||| |||| |||  ||     c
    gggagga gu cggaac caca ccu  ca     u
gaac       c  u      c    c   cc  uuaau 


Annotation confidence Not enough data
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Genome context
JH977797.1: 836846-836924 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from efu-mir-532
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-532

Accession MIMAT0035153
Description Eptesicus fuscus efu-miR-532 mature miRNA
Sequence 11 - CAUGCCUUGAGUGUAGGACCGUU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545