miRBase entry: efu-mir-193b

Stem-loop efu-mir-193b


Accession
MI0028794
Description
Eptesicus fuscus efu-mir-193b precursor miRNA
Gene family
MIPF0000082; mir-193


Sequence

gucccagaauCGGGGUUUUGAGGGCGAGAUGAGUuuauguuuuauccaacuggcccacaaagucccgcuuuugggguca
(((((((((.((((((((((.((((.((.((.((.........)).)).)).)))).)))))))))).)))))))).).

Structure
- -        u          A    G  A  A  uua 
 g ucccagaa CGGGGUUUUG GGGC AG UG GU   u
 | |||||||| |||||||||| |||| || || ||   g
 c gggguuuu gcccugaaac cccg uc ac ua   u
a u        c          a    g  a  c  uuu 


Annotation confidence Not enough data
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Genome context
JH977625.1: 18505696-18505774 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-193b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-193b

Accession MIMAT0035100
Description Eptesicus fuscus efu-miR-193b mature miRNA
Sequence 11 - CGGGGUUUUGAGGGCGAGAUGAGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545