Stem-loop efu-mir-200c

Accession

MI0028789

Description

Eptesicus fuscus efu-mir-200c precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

ugggggcccccgucuuacccagcaguguuugggugcugguugggagucucUAAUACUGCCGGGUAAUGAUGGAggcccccguc
.(((((((.(((((((((((.((((((((.(((.(((.......)))))).)))))))).)))))).))))).)))))))...

Structure

--u       c     -      a        u   u   gg 
   gggggcc ccguc uuaccc gcaguguu ggg gcu  u
   ||||||| ||||| |||||| |||||||| ||| |||  u
   cccccgg GGUAG AAUGGG CGUCAUAA cuc uga  g
cug       A     U      C        U   -   gg 

Annotation confidence Not enough data

Genome context

JH977638.1: 17349898-17349980 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-200c

Mature efu-miR-200c

• Accession: MIMAT0035096
• Description: Eptesicus fuscus efu-miR-200c mature miRNA
• Sequence: 51 - UAAUACUGCCGGGUAAUGAUGGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545