miRBase entry: efu-mir-9186d-1

Stem-loop efu-mir-9186d-1


Accession
MI0028785
Description
Eptesicus fuscus efu-mir-9186d-1 precursor miRNA
Gene family
MIPF0001868; mir-9186


Sequence

agggggugguuggcgguaucacugguacugaaguaaugccuguccACAGUAGCAGACAUGCCGCCCUCcuccccauac
..((((.((..((((((((..(((.(((((................))))).)))..))))))))..)).))))....

Structure
--ag    u  uu        ca   g     aaguaau 
    gggg gg  ggcgguau  cug uacug       g
    |||| ||  ||||||||  ||| |||||        
    cccc cC  CCGCCGUA  GAC AUGAC       c
caua    u  UC        CA   G     Accuguc 


Annotation confidence Not enough data
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Genome context
JH977721.1: 1116-1193 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-9186d-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186d

Accession MIMAT0035048
Description Eptesicus fuscus efu-miR-9186d mature miRNA
Sequence 46 - ACAGUAGCAGACAUGCCGCCCUC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545