Stem-loop efu-mir-133-1

Accession

MI0028729

Description

Eptesicus fuscus efu-mir-133-1 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

gcuuugcuaaAGCUGGUAAAAUGGAACCAAAUCaacuguucaauggaUUUGGUCCCCUUCAACCAGCUGUAgcugcgcauu
((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))...

Structure

---  uuu    a       AA  U  A        aacug 
   gc   gcua AGCUGGU  AA GG ACCAAAUC     u
   ||   |||| |||||||  || || ||||||||      
   cg   cgAU UCGACCA  UU CC UGGUUUag     u
uua  cgu    G       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

JH977768.1: 1688286-1688366 [+]

Mature efu-miR-133-5p

• Accession: MIMAT0035044
• Description: Eptesicus fuscus efu-miR-133-5p mature miRNA
• Sequence: 11 - AGCUGGUAAAAUGGAACCAAAUC - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-133-3p

• Accession: MIMAT0035045
• Description: Eptesicus fuscus efu-miR-133-3p mature miRNA
• Sequence: 48 - UUUGGUCCCCUUCAACCAGCUGUA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545