miRBase entry: efu-mir-379

Stem-loop efu-mir-379


Accession
MI0028717
Description
Eptesicus fuscus efu-mir-379 precursor miRNA
Gene family
MIPF0000126; mir-379


Sequence

ccugaagagaUGGUAGACUAUGGAACGUAGGCUUUgugauuuuugaccuauguaacaugguccacuaacucucaguauc
.((((.(((.((((.(((((((..((((((((............).)))))))..))))))).)))).)))))))....

Structure
---c    a   a    A       GA       - UUUgu 
    cuga gag UGGU GACUAUG  ACGUAGG C     g
    |||| ||| |||| |||||||  ||||||| |      
    gacu cuc auca cugguac  uguaucc g     a
cuau    -   a    c       aa       a uuuuu 


Annotation confidence Not enough data
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Genome context
JH977717.1: 870016-870094 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from efu-mir-379
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-379

Accession MIMAT0035032
Description Eptesicus fuscus efu-miR-379 mature miRNA
Sequence 11 - UGGUAGACUAUGGAACGUAGGCUUU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545