Stem-loop efu-mir-149

Accession

MI0028706

Description

Eptesicus fuscus efu-mir-149 precursor miRNA

Gene family

MIPF0000274; mir-149

Sequence

gugcccgagcUCUGGCUCCGUGUCUUCACUCCCgugugugucugaggagggagggagggacgggggcugugcuggggcuacc
((((((.(((.(.(.((((((.(((((.(((((.(.(.......).).)))))))))).)))))).).).))).)))).)).

Structure

-  -    g   U U G      G     A     g g gu 
 gu gccc agc C G CUCCGU UCUUC CUCCC u u  g
 || |||| ||| | | |||||| ||||| ||||| | |  u
 ca cggg ucg g c ggggca ggagg gaggg g a  c
c  u    g   u u g      g     -     a g gu 

Annotation confidence Not enough data

Genome context

JH977618.1: 5142243-5142324 [+]

Mature efu-miR-149

• Accession: MIMAT0035021
• Description: Eptesicus fuscus efu-miR-149 mature miRNA
• Sequence: 11 - UCUGGCUCCGUGUCUUCACUCCC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545