miRBase entry: efu-mir-19

Stem-loop efu-mir-19


Accession
MI0028679
Description
Eptesicus fuscus efu-mir-19 precursor miRNA
Gene family
MIPF0000011; mir-19


Sequence

uacuuacgauuaguuuugcagguuugcauuucagcguauauauguauauauggCUGUGCAAAUCCAUGCAAAACUGAUugugauaaug
...(((((((((((((((((((((((((...((((.((((((....)))))))))))))))).)).))))))))))))))))).....

Structure
--uac                 -  -      uuu    g      u 
     uuacgauuaguuuugca gg uuugca   cagc uauaua g
     ||||||||||||||||| || ||||||   |||| ||||||  
     aguguUAGUCAAAACGU CC AAACGU   GUCg guauau u
guaau                 A  U      ---    -      a 


Annotation confidence Not enough data
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Genome context
JH977765.1: 950805-950892 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-19
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-19

Accession MIMAT0034994
Description Eptesicus fuscus efu-miR-19 mature miRNA
Sequence 54 - CUGUGCAAAUCCAUGCAAAACUGAU - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545