miRBase entry: efu-let-7c

Stem-loop efu-let-7c

Accession

MI0028628

Description

Eptesicus fuscus efu-let-7c precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

gugcauccggGUUGAGGUAGUAGGUUGUAUGGUUUagaguuauacccugggaguuaacuguacaaccuucuagcuuuccuuggagcacacu
((((.((((((..(((.(((.(((((((((((((.....(((.....))).....))))))))))))).))).)))..))))))))))...

Structure

---    a      UU   G   U             Uagag   u 
   gugc uccggG  GAG UAG AGGUUGUAUGGUU     uua a
   |||| ||||||  ||| ||| |||||||||||||     ||| c
   cacg agguuc  uuc auc uccaacaugucaa     ggu c
uca    -      cu   g   u             uugag   c

Annotation confidence Not enough data

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Genome context

JH977643.1: 519414-519504 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-let-7c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-let-7c

Accession	MIMAT0034943
Description	Eptesicus fuscus efu-let-7c mature miRNA
Sequence	11 - GUUGAGGUAGUAGGUUGUAUGGUUU - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545