miRBase entry: efu-mir-9285

Stem-loop efu-mir-9285

Accession

MI0028622

Description

Eptesicus fuscus efu-mir-9285 precursor miRNA

Sequence

ggcugcaagcUUGACUUCUGCUCCCAGAGCacaguggcuggggagggcauugcgcugguuugugggaauggaagggcgcugcugguc
(((((((.((....((((((.(((((((((.((((((((......)))....))))))))).))))).))))))...))))).))))

Structure

    -   a  UUGA      C     -    a     ----   gg 
ggcu gca gc    CUUCUG UCCCA GAGC cagug    gcu  g
|||| ||| ||    |||||| ||||| |||| |||||    |||   
cugg cgu cg    gaaggu agggu uuug gucgc    cgg  g
    u   -  -cgg      a     g    -     guua   ga

Annotation confidence Not enough data

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Genome context

JH977683.1: 6856786-6856872 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9285

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9285

Accession	MIMAT0034936
Description	Eptesicus fuscus efu-miR-9285 mature miRNA
Sequence	11 - UUGACUUCUGCUCCCAGAGC - 30
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545