miRBase entry: efu-mir-9279a-2

Stem-loop efu-mir-9279a-2


Accession
MI0028611
Description
Eptesicus fuscus efu-mir-9279a-2 precursor miRNA
Gene family
MIPF0001911; mir-9279


Sequence

gucugggagaggccacgcgccccuggguccaggugaggccacgcgcCCCUGGAUCCGGGUGAGGCCUUgcaccccugg
....(((.((((((...(((((..(((((((((...(((.....))))))))))))))))).))))))...)))....

Structure
gucu   --a      acg     cu         uga   c 
    ggg   gaggcc   cgccc  ggguccagg   ggc a
    |||   ||||||   |||||  |||||||||   ||| c
    ccc   UUCCGG   GUGGG  CCUAGGUCC   Ccg g
gguc   acg      --A     --         ---   c 


Annotation confidence Not enough data
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Genome context
JH977738.1: 167894-167971 [+]

Database links

Mature efu-miR-9279a

Accession MIMAT0034917
Description Eptesicus fuscus efu-miR-9279a mature miRNA
Sequence 47 - CCCUGGAUCCGGGUGAGGCCUU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545