miRBase entry: efu-mir-9279a-1

Stem-loop efu-mir-9279a-1


Accession
MI0028602
Description
Eptesicus fuscus efu-mir-9279a-1 precursor miRNA
Gene family
MIPF0001911; mir-9279


Sequence

gucugggagaggccacgcgccccuggguccgggugaggccauguguCCCUGGAUCCGGGUGAGGCCUUgcgcaccuag
...((.(.((((((...(((((..(((((((((.((.((...)).)))))))))))))))).)))))).).)).....

Structure
--guc  g a      acg     cu         u  g  c 
     ug g gaggcc   cgccc  ggguccggg ga gc  
     || | ||||||   |||||  ||||||||| || || a
     ac c UUCCGG   GUGGG  CCUAGGUCC Cu ug  
gaucc  g g      --A     --         -  g  u 


Annotation confidence Not enough data
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Genome context
JH977615.1: 15682697-15682774 [+]

Database links

Mature efu-miR-9279a

Accession MIMAT0034917
Description Eptesicus fuscus efu-miR-9279a mature miRNA
Sequence 47 - CCCUGGAUCCGGGUGAGGCCUU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545