Stem-loop efu-mir-490

Accession

MI0028594

Description

Eptesicus fuscus efu-mir-490 precursor miRNA

Gene family

MIPF0000229; mir-490

Sequence

auuguucgacaccauggaucuccaggugggucacguuuugagauacACCAACCUGGAGGACUCCAUGCUGUugagcuguuc
...((((((((.(((((((((((((((.(((...((........))))).)))))))))..)))))).)))))))).....

Structure

--auu        c      --         g   cac  uuu 
     guucgaca caugga  ucuccaggu ggu   gu   g
     |||||||| ||||||  ||||||||| |||   ||    
     cgaguUGU GUACCU  GGAGGUCCA CCA   ca   a
cuugu        C      CA         A   ---  uag 

Annotation confidence Not enough data

Genome context

JH977672.1: 4315442-4315522 [-]

Mature efu-miR-490

• Accession: MIMAT0034909
• Description: Eptesicus fuscus efu-miR-490 mature miRNA
• Sequence: 47 - ACCAACCUGGAGGACUCCAUGCUGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545